📄️ Threshold
In the Threshold menu, select any number of variables for analysis with Phenoplex.
📄️ Co-occurrence Matrix
In this section, we will explore the Co-occurrence Matrix, which helps in understanding the spatial relationships between different phenotypes. This matrix is essential for analyzing how phenotypes are distributed in relation to each other within the sample.
📄️ Phenotype List
This section provides a description of the Phenotype List, where identified phenotypes can be managed and reviewed. It serves as a central repository for all phenotypic data.
📄 ️ Neighborhood Count
The last feature in the Phenoplex guided workflow is the Neighborhood count feature used for neighborhood analysis.
📄️ Nearest neighbor
To help understand the spatial relationships between specific biomarker-positive targets and neighboring objects within a defined distance, the user can use the feature "Nearest Neighbor" in the Phenoplex Guided Workflow.